BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F04SP1|AL428755
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1390 1720 0.0
>3x_Contig1390
Length = 7609
Score = 1720 bits (867), Expect = 0.0
Identities = 875/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Plus
Query: 1 gatccacatctgaagacagggtctaggctataatttgttccttggttgaattgtactcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4163 gatccacatctgaagacagggtctaggctataatttgttccttggttgaattgtactcta 4222
Query: 61 gagggaaaaacatgagctaaccattccaagtaagcttcgttactttgcgtatcaccgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4223 gagggaaaaacatgagctaaccattccaagtaagcttcgttactttgcgtatcaccgaga 4282
Query: 121 gagtttagtatttccgagccaatcgaccataaacttcgtacatcaacatcctctaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4283 gagtttagtatttccgagccaatcgaccataaacttcgtacatcaacatcctctaatctg 4342
Query: 181 ataagaatcgaaaaacaccgataagcaatttcccaattctgatttaagacgtttgtatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4343 ataagaatcgaaaaacaccgataagcaatttcccaattctgatttaagacgtttgtatat 4402
Query: 241 aacagttgattcaaatgagctaaatgcattgttttttgttttgaaagttgcggcttcgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4403 aacagttgattcaaatgagctaaatgcattgttttttgttttgaaagttgcggcttcgga 4462
Query: 301 tatacgtcaaagccaaatttaagagcttgaaagtacatgttaagttttttggtttgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4463 tatacgtcaaagccaaatttaagagcttgaaagtacatgttaagttttttggtttgataa 4522
Query: 361 ttcaatttctttgtaactgatttagtagcagccttttcaagtttcttaactgcattgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 ttcaatttctttgtaactgatttagtagcagccttttcaagtttcttaactgcattgtaa 4582
Query: 421 gtratcttttttctttgaatcggggttctaagcgctgtatttacattccatacttcgaaa 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 gtaatcttttttctttgaatcggggttctaagcgctgtatttacattccatacttcgaaa 4642
Query: 481 gtatgttgaggtttgatgtgactctcatagaattgtgtttcaggatcattttcatcagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 gtatgttgaggtttgatgtgactctcatagaattgtgtttcaggatcattttcatcagtt 4702
Query: 541 ccatcttcatccccgtccaattcttcatcagaagaatccaatgcgtttcctaacacactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 ccatcttcatccccgtccaattcttcatcagaagaatccaatgcgtttcctaacacactt 4762
Query: 601 tgcagcctacgttttcttcggtgttttttttccagatcagcagcttctgcttcactgctc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 tgcagcctacgttttcttcggtgttttttttccagatcagcagcttctgcttcactgctc 4822
Query: 661 tcactattttcaggcgtaaggatgccattagtcacattatcagcttctgaagatacagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 tcactattttcaggcgtaaggatgccattagtcacattatcagcttctgaagatacagag 4882
Query: 721 gcttcagactgattatagttaagctgatcatatttcctttttaacgaattgatgtattga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4883 gcttcagactgattatagttaagctgatcatatttcctttttaacgaattgatgtattga 4942
Query: 781 tatcgtattttcctacgtttcctatttcttgaacttcggtctatcaccgggagctgaaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4943 tatcgtattttcctacgtttcctatttcttgaacttcggtctatcaccgggagctgaaac 5002
Query: 841 atggtttatactgtg-aacaatgttacactaccataa 876
||||||||||||||| |||||||||||||||||||||
Sbjct: 5003 atggtttatactgtgaaacaatgttacactaccataa 5039
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8015
Number of Sequences: 1807
Number of extensions: 8015
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)